3.1 Dynamics of Condensed Phase Molecular Systems
Project coordinators: E. T. J. Nibbering, O. KornilovTopic 1: Publications (2000-now)
2022
C1-P-2022.06
Short-range slowdown of water solvation dynamics around SO42- - Mg2+ ion pairs
ACS Physical Chemistry Au
2
(2022) 506-514
C1-P-2022.09
Short-range slowdown of water solvation dynamics around SO42- - Mg2+ ion pairs
Ultrafast Phenomena 2022
Optica Publishing Group (2022) F2A.2/1-2
2021
C1-P-2021.01
Phosphate vibrations probe electric fields in hydrated biomolecules: spectroscopy, dynamics, and interactions
Journal of Physical Chemistry B
125
(2021) 3899-3908
C1-P-2021.03
Contact pairs of RNA with magnesium ions-electrostatics beyond the Poisson-Boltzmann equation
Biophysical Journal
120
(2021) 5322–5332
C1-P-2020.04
Magnesium contact ions stabilize the tertiary structure of transfer RNA: electrostatics mapped by two-dimensional infrared spectra and theoretical simulations
Journal of Physical Chemistry B
125
(2021) 740-747
2020
C1-P-2020.07
Structural discrimination of phosphate contact ion pairs in water by femtosecond 2D-IR spectroscopy
The 22nd International Conference on Ultrafast Phenomena 2020
OSA Publishing (2020) doi.org/10.1364/UP.2020.M4B.9
C1-P-2019.08
Aqueous contact ion pairs of phosphate groups with Na+, Ca2+ and Mg2+ - structural discrimination by femtosecond infrared spectroscopy and molecular dynamics simulations
Zeitschrift für Physikalische Chemie
234
(2020) 1453-1474
C1-P-2019.09
Change of hydration patterns upon RNA melting probed by excitations of phosphate backbone vibrations
Journal of Physical Chemistry B
124
(2020) 2132-2138
2019
C1-P-2018.05
Ultrafast dynamics of hydrated excess protons in CH3CN:H2O mixtures
Ultrafast Phenomena XXI
205
EPJ Web of Conferences (2019) 09003/1-3
C1-P-2018.06
Interactions of RNA and water probed by 2D-IR spectroscopy
Ultrafast Phenomena XXI
205
EPJ Web of Conferences (2019) 05007/1-3
C1-P-2018.10
Phosphate–magnesium ion interactions in water probed by ultrafast two-dimensional infrared spectroscopy
Journal of Physical Chemistry Letters
10
(2019) 238-243
C1-P-2019.06
Contact ion pairs of phosphate groups in water: two-dimensional infrared spectroscopy of dimethyl phosphate and ab initio simulations
Journal of Physical Chemistry Letters
10
(2019) 6281−6286
2018
C1-P-2018.07
Ultrafast vibrational relaxation and energy dissipation of hydrated excess protons in polar solvents
Chemical Physics Letters
713
(2018) 111-116
C1-D-2018.01
The hydrated excess proton studied by nonlinear time-resolved vibrational spectroscopyDissertation
Humboldt-Universität zu Berlin (2018)
C1-P-2017.06
Vibrational dynamics and couplings of the hydrated RNA backbone – a 2D-IR study
Journal of Physical Chemistry Letters
9
(2018) 583-587
2017
C1-P-2017.02
Molecular couplings and energy exchange between DNA and water mapped by femtosecond infrared spectroscopy of backbone vibrations
Structural Dynamics
4
(2017) 044015/1-15
C0-P-2017.01
Water dynamics in the hydration shells of biomolecules
Chemical Reviews
117
(2017) 10694–10725
C3-P-2017.06
Water librations in the hydration shell of phospholipids
Journal of Physical Chemistry Letters
8
(2017) 4492-4497
C1-P-2017.05
Large-amplitude transfer motion of hydrated excess protons mapped by ultrafast 2D IR spectroscopy
Science
357
(2017) 491–495
2016
C1-P-2016.03
Range, magnitude, and ultrafast dynamics of electric fields at the hydrated DNA surface
Journal of Physical Chemistry Letters
7
(2016) 3131−3136
C1-P-2016.12
Hydration of native DNA: ultrafast structural dynamics and short-range electric fields
Ultrafast Phenomena XX
Optical Society of America (2016) UM4A.5/1-3
C1-P-2015.10
Ultrafast vibrational dynamics of the DNA backbone at different hydration levels mapped by two-dimensional infrared spectroscopy
Structural Dynamics
3
(2016) 043202/1-15
C1-P-2016.05
Predominance of short range Coulomb forces in phosphate-water interactions - a theoretical analysis
Journal of Chemical Physics
145
(2016) 115101/1-12
C1-P-2016.02
The hydrated excess proton in the Zundel cation (H5O2)+: The role of ultrafast solvent fluctuations
Angewandte Chemie-International Edition
55
(2016) 10600–10605
C1-P-2016.01
Ultrafast vibrational energy flow in water monomers in acetonitrile
Chemical Physics Letters
652
(2016) 50-55
C1-P-2016.10
The hydrated excess proton - ultrafast vibrational dynamics of the Zundel cation (H5O2)+
Ultrafast Phenomena XX
Optical Society of America (2016) UTh4A.8/1-3
C1-P-2016.06
Coherent Dynamics of Phosphate Ions in Bulk H2O
Ultrafast Phenomena XX
Optical Society of America (2016) UTh3B.7/1-3
2015
C1-P-2014.10
Hydrogen bond enhancement of fermi resonances explored with ultrafast IR two-colour pump-probe and 2D-IR spectroscopy
Ultrafast Phenomena XIX
Springer (2015) 471-474
C0-P-2014.01
Wasser und Biomoleküle: Ultraschnelle Dynamik von Strukturen und Schwingungen
Chemie in Unserer Zeit
49
(2015) 48-58
C1-P-2014.06
Ultrafast phosphate hydration dynamics in bulk H2O
Journal of Chemical Physics
142
(2015) 212406/1-9
C1-P-2015.09
Anharmonicities and coherent vibrational dynamics of phosphate ions in bulk H2O
Physical Chemistry Chemical Physics
17
(2015) 29906-29917
C1-P-2014.08
Hydrated phospholipid surfaces probed by ultrafast 2D spectroscopy of phosphate vibrations
Ultrafast Phenomena XIX
Springer (2015) 301-304
C1-P-2014.05
Hydrogen bonding induced enhancement of Fermi resonances: ultrafast vibrational energy flow dynamics in aniline‐d5
Journal of Physical Chemistry B
119
(2015) 2711−2725
C1-P-2015.05
C1-P-2015.03
Anharmonic backbone vibrations in ultrafast processes at the DNA−water interface
Journal of Physical Chemistry B
119
(2015) 9670−9677
2014
C3-P-2014.03
Ultrafast vibrational dynamics of (BH4)- ions in liquid and crystalline environments
Journal of Chemical Physics
141
(2014) 034506/1-9
C1-P-2013.08
Structural dynamics of hydrated phospholipid surfaces probed by ultrafast 2D spectroscopy of phosphate vibrations
Journal of Physical Chemistry Letters
5
(2014) 506-511
C1-D-2014.01
Ultrafast dynamics of phospholipid-water interfaces studied by nonlinear time-resolved vibrational spectroscopyDissertation
Humboldt-Universität zu Berlin (2014)
2013
C1-P-2013.01
NMR and FT-IR studies on the association of derivatives of thymidine, adenosine, and 6-N-methyl-adenosine in aprotic solvents
Zeitschrift für Physikalische Chemie
227
(2013) 723-749
C1-P-2012.09
N-H stretching excitations in adenosine-thymidine base pairs in solution: Pair geometries, infrared line shapes and ultrafast vibrational dynamics
Journal of Physical Chemistry A
117
(2013) 594-606
C1-P-2012.12
Ultrafast IR pump-probe and 2D-IR photon echo spectroscopy of adenosine-thymidine base pairs
Ultrafast Phenomena XVIII
EDP Sciences (2013) 05019/1-3
C1-P-2013.07
Hydrogen-bonding-induced enhancement of Fermi Resonances: A linear IR and nonlinear 2D-IR study of aniline-d5
Journal of Physical Chemistry B
117
(2013) 15843-15855
C1-P-2013.06
Ultrafast two-dimensional infrared spectroscopy of guanine-cytosine base pairs in DNA oligomers
Journal of Physical Chemistry B
117
(2013) 14009-14017
C1-P-2012.11
N-H stretching vibrations of guanosine-cytidine base pairs in solution: ultrafast dynamics, couplings and line shapes
Journal of Physical Chemistry A
117
(2013) 845-854
C1-P-2012.03
Ultrafast structural and vibrational dynamics of the hydration shell around DNA
Ultrafast Phenomena XVIII
EDP Sciences (2013) 06004/1-3
C1-P-2012.13
Note: An environmental cell for transient spectroscopy on solid samples in controlled atmospheres
Review of Scientific Instruments
84
(2013) 036101/1-2
C1-P-2012.06
Ultrafast vibrational dynamics of water confined in phospholipid reverse micelles
Ultrafast Phenomena XVIII
EDP Sciences (2013) 06003/1-3
2012
C1-P-2011.11
Vibrational dynamics of the water shell of DNA studied by femtosecond two-dimensional infrared spectroscopy
Journal of Photochemistry and Photobiology A-Chemistry
234
(2012) 49-56
C1-D-2012.02
Ultrafast two-dimensional infrared spectroscopy of hydrogen-bonded base pairs and hydrated DNADissertation
Humboldt-Universität (2012)
C1-P-2012.02
N-H streching modes of adenosine monomer in solution studied by ultrafast nonlinear infrared spectroscopy and Ab Initio calculations
Journal of Physical Chemistry A
116
(2012) 7636-7644
C1-P-2012.08
Ultrafast energy redistribution in local hydration shells of phospholipids - a two-dimensional infrared study
Journal of Physical Chemistry Letters
3
(2012) 3646-3651
2011
C1-P-2010.09
Dynamics and couplings of N-H stretching excitations of guanosine-cytidine base pairs in solution
Journal of Physical Chemistry B
115
(2011) 5484-5492
C1-P-2011.10
Decelerated water dynamics and vibrational couplings of hydrated DNA mapped by two-dimensional infrared spectroscopy
Journal of Physical Chemistry B
115
(2011) 13093-13100
C1-P-2010.13
Ultrafast vibrational dynamics of hydrated DNA studied by 2D infrared spectroscopy
Ultrafast Phenomena XVII
Oxford University Press (2011) 472-474
C1-P-2010.07
Femtosecond two-dimensional infrared spectroscopy of adenine-thymine base pairs in DNA oligomers
Journal of Physical Chemistry B
115
(2011) 1262-1267
C1-P-2010.12
Ultrafast dynamics of phosphate-water interactions in hydrated DNA
Ultrafast Phenomena XVII
Oxford University Press (2011) 493-495
C1-D-2011.05
Ultrafast vibrational dynamics of hydrogen-bonded base pairs and hydrated DNADissertation
Humboldt-Universität (2011)
2010
C1-P-2010.05
The hydrogen-bonded 2-pyridone dimer model system. 2. Femtosecond mid-infrared pump-probe study
The Journal of Physical Chemistry A
114
(2010) 12195-12201
C1-P-2010.02
Ultraschnelle Schwingungsdynamik und lokale Wechselwirkungen in hydratisierter DNA
Angewandte Chemie
122
(2010) 3680-3693
C1-P-2009.06
Ultrafast vibrational dynamics and local interactions of hydrated DNA
Angewandte Chemie-International Edition
49
(2010) 3598-3611
C1-P-2010.01
Ultrafast energy exchange via water-phosphate interactions in hydrated DNA
Journal of Physical Chemistry B
114
(2010) 7951-7957
C1-P-2010.04
The hydrogen-bonded 2-pyridone dimer model system. 1. Combined NMR and FT-IR spectroscopy study
Journal of Physical Chemistry A
114
(2010) 7749-7760
2009
C1-P-2008.10
Ultrafast dynamics of N-H and O-H stretching excitations in hydrated DNA oligomers
Chemical Physics
357
(2009) 36-44
C0-P-2009.05
Pathways for H2O bend vibrational relaxation in liquid water
Journal of Physical Chemistry A
113
(2009) 8949-8962
C0-P-2009.04
Ultrafast energy transfer from the intramolecular bending vibration to librations in liquid water
Journal of Physical Chemistry A
113
(2009) 6657-6665
C1-P-2008.04
Ultrafast temperature jumps in liquid water studied by infrared-pump and X-ray absorption-probe spectroscopy
Ultrafast Phenomena XVI
Springer (2009) 505-507
C1-P-2008.14
Time-resolved X-ray absorption spectroscopy of infrared-laser induced temperature jumps in liquid water
Applied Physics A
96
(2009) 11-18
C0-P-2009.02
Ultrafast memory loss and relaxation processes in hydrogen bonded systems
Biological Chemistry
390
(2009) 1125-1132
C0-P-2009.01
Two-dimensional infrared spectroscopy of intermolecular hydrogen bonds in the condensed phase
Accounts of Chemical Research
42
(2009) 1220-1228
C1-P-2008.05
Ultrafast vibrational dynamics of adenine-thymine base pairs in hydrated DNA
Ultrafast Phenomena XVI
Springer (2009) 535-537
2008
C1-P-2008.01
Ultrafast temperature jump in liquid water studied by a novel infrared pump - X-ray probe technique
Applied Physics A
92
(2008) 511-516
C1-P-2007.08
Temperature dependence of the two-dimensional infrared spectrum of liquid H2O
Proc. Nat. Acad. Sci. USA
105
(2008) 437-442
C0-P-2008.01
Ultrafast structural dynamics of hydrogen bonds in the liquid phase
L'Actualité Chimique
320/321
(2008) 27-32
C1-P-2008.08
Ultrafast vibrational dynamics of adenine-thymine base pairs in DNA oligomers
Journal of Physical Chemisty B
112
(2008) 11194-11197
2007
C1-P-2006.02
Ultrafast relaxation dynamics of O-H bending and librational excitations in liquid H2O
Ultrafast Phenomena XV
Springer (2007) 436-438
C1-P-2006.13
Ultrafast structural dynamics of water induced by dissipation of vibrational energy
Journal of Physical Chemistry A
111
(2007) 743-746
C1-P-2006.05
2D-IR photon echo spectroscopy of liquid H2O - combination of novel nanofluidics and diffractive optics deciphers ultrafast structural dynamics
Ultrafast Phenomena XV
Springer (2007) 335-337
C1-P-2007.05
Ultrafast vibrational dynamics and anharmonic couplings of hydrogen-bonded dimers in solution
Chemical Physics
341
(2007) 175-188
C0-P-2004.02
Coherent low-frequency motions in condensed phase hydrogen bonding and transfer
Handbook of Hydrogen Transfer Reactions; Vol. 2: Physical and Chemical Aspects
2
Wiley-VCH (2007) 459-477
2006
C1-P-2003.15
Ultrafast vibrational dynamics of hydrogen bonded dimers in solution
Time Resolved Vibrational Spectroscopy XI
Leo S. Olschki (2006) 69-75
C1-P-2006.12
Ultrafast dynamics of vibrational N-H stretching excitations in the 7-azaindole dimer
Chemical Physics Letters
432
(2006) 146-151
C1-P-2006.01
Vibrational couplings and ultrafast relaxation of the O-H bending mode in liquid H2O
Chemical Physics Letters
424
(2006) 66-70
2005
C1-P-2004.17
Anharmonic couplings underlying the ultrafast vibrational dynamics of hydrogen bonds in liquids
Physical Review Letters
95
(2005) 147402/1-4
C1-P-2004.12
Heterodyne 2D-IR photon echo spectroscopy of multi-level OH stretching coherences in hydrogen bonds
Ultrafast Phenomena XIV
Springer Verlag (2005) 407-409
C1-P-2005.03
Ultrafast vibrational relaxation of O-H bending and librational excitations in liquid H2O
Chemical Physics Letters
404
(2005) 389-393
C1-P-2004.16
Ultrafast memory loss and energy redistribution in the hydrogen bond network of liquid H2O
Nature
434
(2005) 199-202
2004
C1-P-2003.04
Ultrafast vibrational dynamics of hydrogen bonds in the condensed phase
Chemical Reviews
104
(2004) 1887-1914
C1-P-2004.02
Coherent low-frequency motions of hydrogen bonded acetic acid dimers in the liquid phase
Journal of Chemical Physics
121
(2004) 902-913
C1-P-2003.14
Ultrafast vibrational dynamics of hydrogen-bonded dimers in solution
Femtochemistry and Femtobiology: Ultrafast Events in Molecular Science
Elsevier (2004) 157-164
2003
C1-P-2002.17
Vibrational multilevel quantum coherence due to anharmonic couplings in intermolecular hydrogen bonds
Physical Review Letters
91
(2003) 197401/1-4
C1-P-2002.07
A mid-infrared photon echo study of liquid water
Ultrafast Phenomena XIII
Springer Verlag (2003) 577-579
2002
C1-P-2001.11
A photon echo peak shift study of liquid water
Journal of Physical Chemistry A
106
(2002) 2341-2350
C1-P-2001.18
Ultrafast dynamics of hydrogen bonds in the liquid phase: Vibrational quantum beats and dephasing
Femtochemistry and Femtobiology
World Scientific (2002) 169-184
C1-P-2001.19
Femtosecond mid-infrared photon echo study of an intramolecular hydrogen bond
Chemical Physics Letters
354
(2002) 256-263
C1-P-2001.16
Femtosecond mid-infrared pump-probe study of wave packet motion in a medium-strong intramolecular hydrogen bond
Bulletin of the Chemical Society of Japan
75
(2002) 909-917
2001
C1-P-2001.03
Ultrafast vibrational dephasing of liquid water
Physical Review Letters
87
(2001) 027401/1-4
C1-P-2000.09
Coherent response of hydrogen bonds in liquids probed by ultrafast vibrational spectroscopy
Journal of Physical Chemistry A
105
(2001) 2929-32
C1-P-2001.06
Coherent vibrational ground-state dynamics of an intramolecular hydrogen bond
Chemical Physics Letters
341
(2001) 56-62
2000
C1-P-2000.19
Ultrafast coherent response of hydrogen bonds
Ultrafast Phenomena XII
Springer Verlag (2000) 542-544